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Organization and Summary of Significant Accounting Policies (Tables) | 6 Months Ended
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Jun. 29, 2018
Organization, Consolidation and Presentation of Financial Statements [Abstract] |
Impact of Adoption of Topic 606 | The impact of the adoption of Topic 606 on the accompanying Condensed Consolidated Balance Sheet as of January 1, 2018 was as follows (in thousands):
| December 31, 2017 |  | Adjustments Due to the Adoption of Topic 606 |  | January 1, 2018
Contract assets: unbilled collaboration revenue, gross: |  |  |  |  |
Current portion | $ | — |  |  | $ | 9,588 |  |  | $ | 9,588 |
Long-term portion | $ | — |  |  | $ | 12,247 |  |  | $ | 12,247 |
Contract liabilities: deferred revenue, gross: |  |  |  |  |
Current portion | $ | 31,984 |  |  | $ | (23,591 | ) |  | $ | 8,393 |
Long-term portion | $ | 238,520 |  |  | $ | (213,079 | ) |  | $ | 25,441 |
Accumulated deficit | $ | (1,829,172 | ) |  | $ | 258,505 |  |  | $ | (1,570,667 | )
The impact of the adoption of Topic 606 on the accompanying Condensed Consolidated Statements of Operations as of and for three and six months ended June 30, 2018 were as follows (in thousands):
| Three Months Ended June 30, 2018
| As Reported |  | Balances Without the Adoption of Topic 606 |  | Effect of Adoption Higher / (Lower)
Collaboration revenues | $ | 40,272 |  |  | $ | 94,420 |  |  | $ | (54,148 | )
Total revenues | $ | 186,108 |  |  | $ | 240,256 |  |  | $ | (54,148 | )
Income before income taxes | $ | 88,395 |  |  | $ | 142,543 |  |  | $ | (54,148 | )
Provision for income taxes | $ | 901 |  |  | $ | 1,906 |  |  | $ | (1,005 | )
Net income | $ | 87,494 |  |  | $ | 140,637 |  |  | $ | (53,143 | )
Net income per share, basic | $ | 0.29 |  |  | $ | 0.47 |  |  | $ | (0.18 | )
Net income per share, diluted | $ | 0.28 |  |  | $ | 0.45 |  |  | $ | (0.17 | )

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- Definition Tabular disclosure of changes in accounting principles, including adoption of new accounting pronouncements, that describes the new methods, amount and effects on financial statement line items. + References Reference 1: http://www.xbrl.org/2003/role/presentationRef -Publisher FASB -Name Accounting Standards Codification -Topic 250 -SubTopic 10 -Section 50 -Paragraph 2 -URI http://asc.fasb.org/extlink&oid=64853466&loc=d3e22580-107794 Reference 2: http://www.xbrl.org/2003/role/presentationRef -Publisher FASB -Name Accounting Standards Codification -Topic 270 -SubTopic 10 -Section 45 -Paragraph 13 -URI http://asc.fasb.org/extlink&oid=68064558&loc=d3e765-108305 Reference 3: http://www.xbrl.org/2003/role/presentationRef -Publisher FASB -Name Accounting Standards Codification -Topic 250 -SubTopic 10 -Section 50 -Paragraph 1 -URI http://asc.fasb.org/extlink&oid=64853466&loc=d3e22499-107794 Reference 4: http://www.xbrl.org/2003/role/presentationRef -Publisher FASB -Name Accounting Standards Codification -Topic 270 -SubTopic 10 -Section S99 -Paragraph 1 -Subparagraph (SX 210.10-01.(b)(6)) -URI http://asc.fasb.org/extlink&oid=27015980&loc=d3e46468-122699 Reference 5: http://www.xbrl.org/2003/role/presentationRef -Publisher FASB -Name Accounting Standards Codification -Topic 250 -SubTopic 10 -Section 50 -Paragraph 3 -URI http://asc.fasb.org/extlink&oid=64853466&loc=d3e22583-107794 Reference 6: http://www.xbrl.org/2003/role/presentationRef -Publisher FASB -Name Accounting Standards Codification -Topic 270 -SubTopic 10 -Section 45 -Paragraph 12 -URI http://asc.fasb.org/extlink&oid=68064558&loc=d3e725-108305 + Details
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