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Organization and Summary of Significant Accounting Policies (Tables)
12 Months Ended
Dec. 28, 2018
Organization, Consolidation and Presentation of Financial Statements [Abstract]  
Impact of Adoption of Topic 606 and Topic 842
The impact of the adoption of Topic 606 and Topic 842 on the accompanying Consolidated Balance Sheet as of January 1, 2018 was as follows (in thousands):
 
December 31, 2017
 
Adjustments Due to the Adoption of Topic 606
 
Adjustments Due to the Adoption of Topic 842
 
January 1, 2018
Contract assets: unbilled collaboration revenue, gross:
 
 
 
 
 
 
 
Current portion
$

 
$
9,588

 
$

 
$
9,588

Long-term portion
$

 
$
12,247

 
$

 
$
12,247

Other receivables
$
3,892

 
$

 
$
7,743

 
$
11,635

Property and equipment, net
$
25,743

 
$

 
$
(14,530
)
 
$
11,213

Operating lease right-of-use assets
$

 
$

 
$
8,579

 
$
8,579

Contract liabilities: deferred revenue, gross:
 
 
 
 
 
 
 
Current portion
$
31,984

 
$
(23,591
)
 
$

 
$
8,393

Long-term portion
$
238,520

 
$
(213,079
)
 
$

 
$
25,441

Operating lease liabilities:
 
 
 
 
 
 
 
Other current liabilities(1)
$
16,150

 
$

 
$
3,173

 
$
19,323

Long-term portion of lease liabilities (2)
$
14,938

 
$

 
$
(1,615
)
 
$
13,323

Accumulated deficit
$
(1,829,172
)
 
$
258,505

 
$
234

 
$
(1,570,433
)
____________________
(1) Includes deferred rent and current portion of operating lease liabilities.
(2) Long-term portion of operating lease liabilities and Financing obligation for build-to-suit lease.
The impact of the adoption of Topic 606 and Topic 842 on the accompanying Consolidated Statements of Operations for year ended December 31, 2018 was as follows (in thousands):
 
Year Ended December 31, 2018
 
As Reported
 
Effect of Adoption of Topic 606 Higher / (Lower)
 
Effect of Adoption of Topic 842 Higher / (Lower)
 
Balances Without the Adoption of Topic 606 or 842
Collaboration revenues
$
234,547

 
$
(35,882
)
 
$

 
$
270,429

Total revenues
$
853,826

 
$
(35,882
)
 
$

 
$
889,708

Selling, general and administrative expenses
$
206,366

 
$

 
$
1,204

 
$
205,162

Total operating expenses
$
414,971

 
$

 
$
1,204

 
$
413,767

Interest expense
$

 
$

 
$
(631
)
 
$
(631
)
Total other income (expense), net
$
13,237

 
$

 
$
631

 
$
12,606

Income before income taxes
$
452,092

 
$
(35,882
)
 
$
(573
)
 
$
488,547

Income tax benefit (provision)
$
237,978

 
$
(48,325
)
 
$
73

 
$
286,230

Net income
$
690,070

 
$
(84,207
)
 
$
(500
)
 
$
774,777

Net income per share, basic
$
2.32

 
$
(0.28
)
 
$

 
$
2.60

Net income per share, diluted
$
2.21

 
$
(0.27
)
 
$

 
$
2.48

Estimated Useful Lives of Property and Equipment
Property and equipment are recorded at cost and depreciated using the straight-line method over the following estimated useful lives once it is placed into service: 
Asset Category
 
Estimated Useful Life
Lab equipment
 
5 years
Furniture and fixtures
 
7 years
Office equipment
 
5 years
Computer equipment and software
 
3 years
Leasehold improvements
 
7 to 15 years