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Income Taxes, Reconciliation of Statutory to Effective Tax Rate (Details) - USD ($)
$ in Thousands
3 Months Ended 12 Months Ended
Dec. 31, 2018
Dec. 31, 2018
Dec. 31, 2017
Dec. 31, 2016
Reconciliation Between Effective and Statutory Tax Rate [Abstract]        
Pre-tax loss   $ (76,156) $ (16,763) $ (57,466)
Statutory rate   (15,993) (5,867) (20,113)
State income tax net of federal benefit   (2,202) 820 95
Foreign   1,735 4,299 0
Net change in valuation allowance $ 332,100 (277,924) (86,296) 46,402
Net operating loss expiration   8,864 3,987 0
TEGSEDI licensing gain   59,583 0 0
Tax credits   (73,362) (32,769) (26,954)
Deferred tax true-up   9,947 4,848 2,591
Tax rate change   (1,808) 114,832 0
Non-deductible compensation   3,154 1,575 825
Other non-deductible items   (569) 2,548 324
Akcea deconsolidation adjustment at IPO   0 469 0
Stock-based compensation   (4,199) (14,337) 0
Other   1,633 (89) (236)
Income tax (benefit) expense   $ (291,141) $ (5,980) $ 2,934
Reconciliation Between Effective and Statutory Tax Rate Percentage [Abstract]        
Statutory rate   21.00% 35.00% 35.00%
State income tax net of federal benefit   2.90% (4.90%) (0.20%)
Foreign   (2.30%) (25.60%) 0.00%
Net change in valuation allowance   364.90% 514.80% (80.70%)
Net operating loss expiration   (11.60%) (23.80%) 0.00%
TEGSEDI licensing gain   (78.20%) 0.00% 0.00%
Tax credits   96.30% 195.50% 46.90%
Deferred tax true-up   (13.10%) (28.90%) (4.50%)
Tax rate change   2.40% (685.00%) 0.00%
Non-deductible compensation   (4.10%) (9.40%) (1.40%)
Other nondeductible items   0.70% (15.20%) (0.60%)
Akcea deconsolidation adjustment at IPO   0.00% (2.80%) 0.00%
Stock-based compensation   5.50% 85.50% 0.00%
Other   (2.10%) 0.50% 0.40%
Effective rate   382.30% 35.70% (5.10%)