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Income taxes (Tables)
12 Months Ended
Dec. 31, 2012
Components of Net Deferred Tax Asset

Components of the net deferred tax asset as of December 31, 2011 and 2012 are approximately as follows (in thousands):

 

     December 31,  
     2011     2012  

Deferred tax assets:

    

Net operating loss carryforwards

   $ 557,427      $ 609,471   

Research and development credits

     59,848        65,315   

Capitalized research

     32,440        31,490   

Accrued expenses

     2,827        2,922   

Non-qualified stock option expense

     27,964        30,928   

Depreciation

     8,906        10,025   
  

 

 

   

 

 

 

Total net deferred tax assets

     689,412        750,151   

Valuation allowance

     (689,412     (750,151
  

 

 

   

 

 

 

Net deferred tax assets

   $      $   
  

 

 

   

 

 

 
Effective Income Tax Rate

The Company’s effective income tax rate differs from the statutory federal income tax rate as follows for the years ended December 31, 2010, 2011 and 2012:

 

     December 31,  
     2010     2011     2012  

Federal tax benefit rate

     35.0     35.0     35.0

State tax benefit, net of federal benefit

                     

Permanent items

                     

Intercompany transfer of intellectual property

     (5.0     (5.0     (4.0

Valuation allowance

     (30.0     (30.0     (31.0
  

 

 

   

 

 

   

 

 

 

Effective income tax rate

     0.0     0.0     0.0