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Consolidated Statements of Income (USD $)
In Thousands, except Share data, unless otherwise specified
 3 Months Ended
Mar. 31, 2015
Mar. 31, 2014
Revenues    
Collaboration revenues $ 14,735xon_CollaborationRevenues $ 7,837xon_CollaborationRevenues
Product revenues 8,933us-gaap_SalesRevenueGoodsNet 0us-gaap_SalesRevenueGoodsNet
Service revenues 9,957us-gaap_SalesRevenueServicesNet 0us-gaap_SalesRevenueServicesNet
Other revenues 224us-gaap_OtherSalesRevenueNet 17us-gaap_OtherSalesRevenueNet
Total revenues 33,849us-gaap_Revenues 7,854us-gaap_Revenues
Operating Expenses    
Cost of products 8,675us-gaap_CostOfGoodsSold 33us-gaap_CostOfGoodsSold
Cost of services 5,362us-gaap_CostOfServices 0us-gaap_CostOfServices
Research and development 79,307us-gaap_ResearchAndDevelopmentExpense 12,058us-gaap_ResearchAndDevelopmentExpense
Selling, general and administrative 27,628us-gaap_SellingGeneralAndAdministrativeExpense 13,635us-gaap_SellingGeneralAndAdministrativeExpense
Total operating expenses 120,972us-gaap_OperatingExpenses 25,726us-gaap_OperatingExpenses
Operating loss (87,123)us-gaap_OperatingIncomeLoss (17,872)us-gaap_OperatingIncomeLoss
Other Income, Net    
Unrealized appreciation in fair value of equity securities 115,454us-gaap_FairValueOptionChangesInFairValueGainLoss1 21,922us-gaap_FairValueOptionChangesInFairValueGainLoss1
Interest expense (343)us-gaap_InterestExpense (39)us-gaap_InterestExpense
Interest income 300us-gaap_InvestmentIncomeNonoperating 88us-gaap_InvestmentIncomeNonoperating
Other income (expense), net 267us-gaap_OtherNonoperatingIncomeExpense (8)us-gaap_OtherNonoperatingIncomeExpense
Total other income, net 115,678us-gaap_NonoperatingIncomeExpense 21,963us-gaap_NonoperatingIncomeExpense
Equity in net loss of affiliates (1,956)us-gaap_IncomeLossFromEquityMethodInvestments (536)us-gaap_IncomeLossFromEquityMethodInvestments
Income before income taxes 26,599us-gaap_IncomeLossFromContinuingOperationsBeforeIncomeTaxesExtraordinaryItemsNoncontrollingInterest 3,555us-gaap_IncomeLossFromContinuingOperationsBeforeIncomeTaxesExtraordinaryItemsNoncontrollingInterest
Income tax expense (795)us-gaap_IncomeTaxExpenseBenefit (306)us-gaap_IncomeTaxExpenseBenefit
Net income 25,804us-gaap_ProfitLoss 3,249us-gaap_ProfitLoss
Net loss attributable to the noncontrolling interests 1,293us-gaap_NetIncomeLossAttributableToNoncontrollingInterest 866us-gaap_NetIncomeLossAttributableToNoncontrollingInterest
Net income attributable to Intrexon $ 27,097us-gaap_NetIncomeLoss $ 4,115us-gaap_NetIncomeLoss
Net income attributable to Intrexon per share, basic (usd per share) $ 0.26us-gaap_EarningsPerShareBasic $ 0.04us-gaap_EarningsPerShareBasic
Net income attributable to Intrexon per share, diluted (usd per share) $ 0.25us-gaap_EarningsPerShareDiluted $ 0.04us-gaap_EarningsPerShareDiluted
Weighted average shares outstanding, basic 106,103,848us-gaap_WeightedAverageNumberOfSharesOutstandingBasic 97,325,729us-gaap_WeightedAverageNumberOfSharesOutstandingBasic
Weighted average shares outstanding, diluted 108,141,734us-gaap_WeightedAverageNumberOfDilutedSharesOutstanding 99,338,398us-gaap_WeightedAverageNumberOfDilutedSharesOutstanding