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Earnings Per Share (Table) (Details) - USD ($)
$ / shares in Units, $ in Thousands
 3 Months Ended 6 Months Ended
Jun. 30, 2018
Jul. 01, 2017
Jun. 30, 2018
Jul. 01, 2017
Earnings Per Share [Abstract]        
Earnings (loss) attributable to SunOpta Inc. $ (3,174) $ (408) $ (7,537) $ (11,806)
Dividends and accretion on Series A Preferred Stock (1,974) (1,954) (3,941) (3,894)
Earnings (loss) available to common shareholders $ (5,148) $ (2,362) $ (11,478) $ (15,700)
Earnings Per Share, Basic, by Common Class, Including Two Class Method [Line Items]        
Weighted Average Number of Shares Outstanding, Basic 86,968,000 86,213,000 86,889,000 86,062,000
Dilutive Securities, Effect on Basic Earnings Per Share, Including Options and Restrictive Stock Units 0 0 0 0
Weighted Average Number of Shares Outstanding, Diluted 86,968,000 86,213,000 86,889,000 86,062,000
Antidilutive Securities Excluded from Computation of Earnings Per Share, Amount 1,850,009 2,530,766 2,032,158 2,836,606
Earnings (loss) per share - basic        
Basic $ (0.06) $ (0.03) $ (0.13) $ (0.18)
Earnings (loss) per share - diluted        
Diluted $ (0.06) $ (0.03) $ (0.13) $ (0.18)
Options Held [Member]        
Earnings Per Share, Basic, by Common Class, Including Two Class Method [Line Items]        
Dilutive Securities, Effect on Basic Earnings Per Share, Including Options and Restrictive Stock Units 0 0 0 0
Antidilutive Securities Excluded from Computation of Earnings Per Share, Amount 574,865 832,910 641,857 761,344
Series A Preferred Stock [Member]        
Earnings Per Share, Basic, by Common Class, Including Two Class Method [Line Items]        
Dilutive Securities, Effect on Basic Earnings Per Share, Including Options and Restrictive Stock Units 0 0 0 0
Antidilutive Securities Excluded from Computation of Earnings Per Share, Amount 11,333,333 11,333,333 11,333,333 11,333,333