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Convertible Promissory Notes (Details Textual) - USD ($)
 1 Months Ended 9 Months Ended
Feb. 10, 2016
Feb. 10, 2015
May. 05, 2016
Mar. 31, 2016
Mar. 31, 2015
Jan. 20, 2016
Aug. 31, 2015
Jun. 30, 2015
Debt Conversion [Line Items]                
Debt Instrument, Face Amount             $ 5,200,000  
Unamortized Debt Issuance Expense             401,000  
Derivative Liability, Noncurrent       $ 66,204     $ 103,000 $ 0
Proceeds from Convertible Debt       $ 5,175,000 $ 0      
Class Of Warrant Term       5 years        
Debt Issuance Cost       $ 20,000        
Placement Agents Cash Fee Percentage       8.00%        
Debt Instrument, Convertible, Beneficial Conversion Feature       $ 4,943,073 $ 4,943,073      
Warrants Issued to Purchase of common stock 267,052              
Warrants Exercise Price Per share $ 0.65              
Warrants Exercisable Term 5 years              
Debt Instrument Conversion Premium Percentage       10.00%        
Convertible Debt [Member]                
Debt Conversion [Line Items]                
Interest Payable, Current       $ 66,000        
Convertible Promissory Notes [Member]                
Debt Conversion [Line Items]                
Debt Instrument Interest Rate For Extension Period1       2.00%        
Debt Instrument, Term       18 months        
Debt Instrument, Interest Rate, Stated Percentage Rate Range, Minimum       8.00%        
Debt Instrument, Interest Rate, Stated Percentage Rate Range, Maximum       12.00%        
Convertible Notes Equal To Percentage Of Common Stock       120.00%        
Debt Instrument Conversion Share Price       $ 4.63        
Debt Instrument, Convertible, Terms of Conversion Feature       The Notes are convertible at any time at the noteholder’s discretion into that number of shares of Aytu common stock equal to 120% of the number of shares of common stock calculated by dividing the then outstanding principal and accrued interest by $4.63. A holder of Notes will be obligated to convert on the terms of Aytu’s next public offering of its stock resulting in gross proceeds of at least $5,000,000 (excluding indebtedness converted in such financing) prior to the maturity date of the Notes (a “Qualified Financing”). The principal and accrued interest under the Notes will automatically convert into a number of shares of such equity securities of the Company sold in the Qualified Financing equal to 120% of the principal and accrued interest under such Note divided by the lesser of (i) the lowest price paid by an investor in the Qualified Financing or (ii) $4.63. In the event that Aytu sells equity securities to investors at any time while the Notes are outstanding in a financing transaction that is not a Qualified Financing, then the noteholders will have the option to convert in whole the outstanding principal and accrued interest as of the closing of such financing into a number of shares of Aytu capital stock in an amount equal to 120% of the number of such shares calculated by dividing the outstanding principal and accrued interest by the lesser of (i) the lowest cash price per share paid by purchasers of shares in such financing, or (ii) $4.63.        
Debt Issuance Cost       $ 0        
Debt Conversion, Original Debt, Amount   $ 4,125,000            
Debt Conversion Accrued Interest Amount   $ 143,000            
Debt Conversion, Converted Instrument, Shares Issued   7,879,096            
Long-term Debt, Gross       1,050,000        
Debt Instrument, Convertible, Beneficial Conversion Feature $ 3,900,000     1,040,000        
Debt Instrument, Unamortized Discount       10,000        
Debt Instrument, Convertible, Conversion Price           $ 0.65    
Convertible Promissory Notes [Member] | Placement Agent [Member]                
Debt Conversion [Line Items]                
Debt Conversion, Converted Instrument, Shares Issued     270,772          
Convertible Promissory Notes [Member] | Minimum [Member]                
Debt Conversion [Line Items]                
Proceeds from Convertible Debt       $ 5,000,000        
Convertible Promissory Notes [Member] | Promissory Notes Payable One [Member]                
Debt Conversion [Line Items]                
Debt Instrument, Maturity Date       Jan. 22, 2017        
Convertible Promissory Notes [Member] | Promissory Notes Payable Two [Member]                
Debt Conversion [Line Items]                
Debt Instrument, Maturity Date       Feb. 11, 2017        
Convertible Promissory Notes [Member] | Promissory Notes Payable Three [Member]                
Debt Conversion [Line Items]                
Debt Instrument, Maturity Date       Feb. 28, 2017