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Statements of Operations - USD ($)
 3 Months Ended 12 Months Ended
Sep. 30, 2016
Sep. 30, 2015
Jun. 30, 2016
Jun. 30, 2015
Product and service revenue $ 697,980 $ 465,956 $ 2,050,838 $ 176,068
License revenue 0 21,429 511,607 85,714
Total revenue 697,980 487,385 2,562,445 261,782
Operating expenses        
Cost of sales 191,924 37,325 957,076 88,109
Research and development 232,022 855,874 6,127,772 3,219,361
Research and development - related party 47,998 47,998 191,991 203,992
Sales, general and administrative 5,704,750 1,563,179 8,517,592 3,980,974
Sales, general and administrative - related party 50,772 88,625 307,704 311,004
Impairment of intangible assets     7,500,000 0
Amortization of intangible assets 437,014 57,447 664,707 90,662
Total operating expenses 6,664,480 2,650,448 24,266,842 7,894,102
Loss from operations (5,966,500) (2,163,063) (21,704,397) (7,632,320)
Other income (expense)        
Interest (expense) (415,381) (113,253) (5,491,486) (114,994)
Derivative (expense) income (70,609) 128 (12,572) 0
Unrealized gain (loss) on investment 728,100 0 (971,629) 0
Total other income (expense) 242,110 (113,125) (6,475,687) (114,994)
Net loss, before income tax     (28,180,084) (7,747,314)
Deferred income tax benefit     0 23,910
Net loss $ (5,724,390) $ (2,276,188) $ (28,180,084) $ (7,723,404)
Weighted average number of Aytu common shares outstanding (in shares) 4,898,748 1,188,307 1,741,137 767,326
Basic and diluted Aytu net loss per common share (in dollars per share) $ (1.17) $ (1.92) $ (16.18) $ (10.07)